Commercial · Maintenance

Rooftop unit (RTU) maintenance for commercial buildings: the 2026 guide.

By Pankaj Oberoi·Owner & HVAC Engineer·Oct 21, 2026·10 min read

Rooftop units heat and cool most of the GTA's commercial space — retail, offices, restaurants, warehouses — and they sit out of sight on the roof until the day a tenant calls to say it's 29°C inside. The good news: nearly every RTU failure is preventable with a simple, cheap maintenance rhythm. Here's the one that keeps them running.

What an RTU is and why it fails

A rooftop unit (RTU) is a self-contained HVAC package — fan, coils, compressor, and often a gas heat section — mounted on the roof, ducting conditioned air down into the space below. It's exposed to everything the roof is: sun, rain, snow, wind-blown dust, and in restaurant settings, grease-laden exhaust. That exposure is exactly why RTUs need consistent attention.

Almost every RTU failure comes from one of a short list of causes:

THE EXPENSIVE CHAIN REACTION

The pattern that turns a cheap problem into a capital cost: a clogged filter or dirty coil makes the unit work harder → the compressor runs hotter and longer → months later the compressor fails. A $30 filter and a $200 coil cleaning prevent a $4,000–$8,000 compressor replacement. RTU maintenance is almost entirely about catching the cheap problems before they become the expensive ones.

The RTU maintenance schedule

TaskFrequency
Filter replacementEvery 1–3 months
Belt inspection & tension2× / year
Condenser & evaporator coil cleaning1–2× / year
Refrigerant charge check1× / year
Electrical connections & capacitor test2× / year
Economizer operation test2× / year
Condensate drain clean & flush2× / year
Gas heat section & safety check1× / year (pre-heating)

The two anchor visits are spring (pre-cooling) and fall (pre-heating). Restaurants, buildings near construction or industrial sites, and high-traffic retail should run filters monthly and consider quarterly full service — their units foul far faster.

When to repair vs. replace an RTU

Replace when…Repair when…
Past 15–20 years oldUnder 12 years old
Compressor or heat exchanger failedFailure is a replaceable part
Uses obsolete R-22 refrigerantUses current refrigerant
Single repair > ~50% of replacementRepair is a fraction of replacement

The R-22 line is the one that catches people. Units made before the mid-2010s often run R-22, which is phased out — the refrigerant is expensive and getting scarcer. A major repair on an R-22 unit often means pouring money into a machine you'll replace soon anyway. For those, replacement with a current-refrigerant, higher-efficiency unit is frequently the better economic call.

What RTU replacement costs in the GTA (2026)

Unit size2026 installed cost
5 – 7.5 ton$12,000 – $25,000
10 – 15 ton$22,000 – $40,000
20 – 25 ton$45,000 – $80,000
Crane lift (varies by height/street)+$3,000 – $15,000

Against those capital numbers, maintenance is trivial: a twice-yearly RTU program runs a few hundred dollars per unit per year and routinely adds 5+ years of life while keeping energy use down. The buildings that skip maintenance to save a few hundred dollars are the ones paying $30,000 for an emergency replacement three years early.

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Frequently Asked Questions

How often should a commercial rooftop unit be serviced?

At least twice a year — spring before cooling and fall before heating — with filters changed every 1–3 months. Restaurants and dusty environments benefit from quarterly full service. Each visit covers filters, belts, coils, drains, refrigerant, electrical, and economizer operation.

What is the most common rooftop unit failure?

Clogged filters, slipping belts, dirty condenser coils, failed capacitors/contactors, and seized economizer dampers. Most are cheap to fix during maintenance but become expensive compressor or motor failures if left unaddressed.

When should a rooftop unit be replaced instead of repaired?

Replace if it's past 15–20 years, the compressor or heat exchanger failed, it uses obsolete R-22, or a repair exceeds ~50% of replacement cost. Repair if it's newer and the failure is a replaceable component. R-22 units are often worth replacing outright.

How much does a commercial rooftop unit cost to replace in the GTA?

In 2026: roughly $12,000–$25,000 (5–7.5 ton), $22,000–$40,000 (10–15 ton), $45,000–$80,000 (20–25 ton), installed — plus $3,000–$15,000 for a crane lift. Twice-yearly maintenance extends unit life and defers these costs.